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epic microarray
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1.3k
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ChAMP functional normalization error "subscript out of bounds"
champ
epic microarray
normalization
minfi
6.0 years ago
Laura
• 0
0
votes
2
replies
1.2k
views
Error in read.metharray.exp
minfi
epic microarray
bioconductor
updated 22 months ago by
Lucy
• 0 • written 6.1 years ago by
c.sae-lee2
• 0
0
votes
2
replies
2.0k
views
Error code using ChAMP/Bioconductor, unable to load data from EPIC methylation array
bioconductor
methylation
epic microarray
champ
6.3 years ago
csappleby-mallinder1
• 0
0
votes
4
replies
1.7k
views
minfi "mapToGenome" dimension error
methylation
epic microarray
minfi
methylationepic
7.2 years ago
nhejazi
• 0
0
votes
0
replies
1.0k
views
Shinymethyl 850K Array quality control signal cutoffs
shinymethyl
minfi
epic microarray
methylationepic
qualitycontrol
7.2 years ago
chelsey.ju
• 0
0
votes
0
replies
1.5k
views
Issue with finding .idat files when analysing illumina methylation microarrays using RnBeads
rnbeads
methylation
illumina
epic microarray
7.7 years ago
rasii
• 0
1
vote
7
replies
2.9k
views
dmpFinder return value (minfi)
minfi
dmpfinder
dmp
illuminahumanmethylationepicanno.ilmn10b.hg19
epic microarray
updated 7.8 years ago by
James W. MacDonald
65k • written 7.8 years ago by
Biologist
▴ 110
0
votes
1
reply
1.6k
views
Error in Matrix
minfi
methylation
EPIC microarray
illumina
updated 8.0 years ago by
Kasper Daniel Hansen
★ 6.5k • written 8.0 years ago by
rasii
• 0
8 results • Page
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Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Comment: deseq2 results
by
sajadahmad41454
• 0
could you please tell me if the results are fine or not? ![pca summary][1] ![pca plot][2] [1]: /media/images/ee7d8693-bcbe-4a7a-a566-d3…
Answer: normalization using Deseq2
by
ATpoint
★ 4.1k
counts(dds, normalized=TRUE)
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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